Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Gm27622-201ENSMUST00000183779 60 ntBASIC15.87■□□□□ 0.13
TraipQ8VIG6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Gm28630-201ENSMUST00000187806 498 ntBASIC15.87■□□□□ 0.13
TraipQ8VIG6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.87■□□□□ 0.13
TraipQ8VIG6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.87■□□□□ 0.13
TraipQ8VIG6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Gm14057-201ENSMUST00000120631 482 ntBASIC15.86■□□□□ 0.13
TraipQ8VIG6 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Gm27618-201ENSMUST00000183671 60 ntBASIC15.86■□□□□ 0.13
TraipQ8VIG6 Gm20949-201ENSMUST00000206478 952 ntBASIC15.86■□□□□ 0.13
TraipQ8VIG6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TraipQ8VIG6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TraipQ8VIG6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Gm18766-201ENSMUST00000189811 808 ntBASIC15.85■□□□□ 0.13
TraipQ8VIG6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TraipQ8VIG6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms