Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh18Q8VHR0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh18Q8VHR0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh18Q8VHR0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh18Q8VHR0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Pcdh18Q8VHR0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh18Q8VHR0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh18Q8VHR0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh18Q8VHR0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Gm27742-201ENSMUST00000184667 60 ntBASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh18Q8VHR0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Gm25406-201ENSMUST00000157599 105 ntBASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh18Q8VHR0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh18Q8VHR0 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.42□□□□□ -0.1
Pcdh18Q8VHR0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh18Q8VHR0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh18Q8VHR0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh18Q8VHR0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh18Q8VHR0 Matn2-206ENSMUST00000228570 2798 ntBASIC14.42□□□□□ -0.1
Pcdh18Q8VHR0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh18Q8VHR0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pcdh18Q8VHR0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh18Q8VHR0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh18Q8VHR0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms