Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Gm8344-201ENSMUST00000119813 856 ntBASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Gm6550-201ENSMUST00000187574 993 ntBASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4aQ8VEJ9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4aQ8VEJ9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4aQ8VEJ9 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.52□□□□□ -0.08
Vps4aQ8VEJ9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4aQ8VEJ9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Vps4aQ8VEJ9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Vps4aQ8VEJ9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4aQ8VEJ9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4aQ8VEJ9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4aQ8VEJ9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Vps4aQ8VEJ9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Gm14057-201ENSMUST00000120631 482 ntBASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Gm12497-201ENSMUST00000138778 237 ntBASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Auts2-212ENSMUST00000178555 309 ntBASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Gm18622-201ENSMUST00000219361 595 ntBASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.52□□□□□ -0.09
Vps4aQ8VEJ9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4aQ8VEJ9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4aQ8VEJ9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4aQ8VEJ9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Vps4aQ8VEJ9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4aQ8VEJ9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Vps4aQ8VEJ9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4aQ8VEJ9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4aQ8VEJ9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4aQ8VEJ9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4aQ8VEJ9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Vps4aQ8VEJ9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms