Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdt1Q8R4E9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Mir1895-201ENSMUST00000122615 79 ntBASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdt1Q8R4E9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Gm27494-201ENSMUST00000184735 189 ntBASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdt1Q8R4E9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 268.6 ms