Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Gm10154-201ENSMUST00000084445 354 ntBASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Mir3113-201ENSMUST00000175478 76 ntBASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Gm27301-201ENSMUST00000184012 127 ntBASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Mir8117-201ENSMUST00000184773 107 ntBASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Gm44492-201ENSMUST00000197012 141 ntBASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn1Q8K0T0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn1Q8K0T0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Gm8000-201ENSMUST00000188378 592 ntBASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Gm5264-201ENSMUST00000190584 848 ntBASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn1Q8K0T0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Rtn1Q8K0T0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rtn1Q8K0T0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.21■□□□□ 0.34
Rtn1Q8K0T0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rtn1Q8K0T0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms