Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Gm9727-201ENSMUST00000161387 555 ntBASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfwd3Q8CIK8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Gm18246-201ENSMUST00000221023 728 ntBASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfwd3Q8CIK8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfwd3Q8CIK8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms