Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim52Q8CDV4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim52Q8CDV4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim52Q8CDV4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim52Q8CDV4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trim52Q8CDV4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim52Q8CDV4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim52Q8CDV4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim52Q8CDV4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim52Q8CDV4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim52Q8CDV4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim52Q8CDV4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Syt7-204ENSMUST00000223586 1344 ntBASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim52Q8CDV4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Gm15653-201ENSMUST00000119247 907 ntBASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Mir1897-201ENSMUST00000122581 272 ntBASIC18.34■□□□□ 0.53
Trim52Q8CDV4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Gm43703-201ENSMUST00000200523 763 ntBASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Gm7730-201ENSMUST00000212486 454 ntBASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim52Q8CDV4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim52Q8CDV4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim52Q8CDV4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim52Q8CDV4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim52Q8CDV4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trim52Q8CDV4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim52Q8CDV4 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.33■□□□□ 0.53
Trim52Q8CDV4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim52Q8CDV4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
Trim52Q8CDV4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trim52Q8CDV4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.33■□□□□ 0.52
Trim52Q8CDV4 Gm45453-201ENSMUST00000211758 853 ntBASIC18.33■□□□□ 0.52
Trim52Q8CDV4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim52Q8CDV4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trim52Q8CDV4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim52Q8CDV4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim52Q8CDV4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim52Q8CDV4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim52Q8CDV4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim52Q8CDV4 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim52Q8CDV4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim52Q8CDV4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim52Q8CDV4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim52Q8CDV4 Asic1-205ENSMUST00000228185 1818 ntBASIC18.33■□□□□ 0.52
Trim52Q8CDV4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim52Q8CDV4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim52Q8CDV4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim52Q8CDV4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim52Q8CDV4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim52Q8CDV4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim52Q8CDV4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms