Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Sybu-209ENSMUST00000228639 4113 ntBASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Usp44Q8C2S0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp44Q8C2S0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp44Q8C2S0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp44Q8C2S0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp44Q8C2S0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Gm15483-201ENSMUST00000120338 456 ntBASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Gm45612-201ENSMUST00000211320 160 ntBASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp44Q8C2S0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp44Q8C2S0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp44Q8C2S0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp44Q8C2S0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp44Q8C2S0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp44Q8C2S0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms