Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ppp4r4Q8C0Y0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ppp4r4Q8C0Y0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ppp4r4Q8C0Y0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm14722-201ENSMUST00000118943 689 ntBASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm11764-201ENSMUST00000120221 623 ntBASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.12■□□□□ 0.01
Ppp4r4Q8C0Y0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm43514-201ENSMUST00000198852 424 ntBASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms