Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Gm15427-201ENSMUST00000117288 531 ntBASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.71■□□□□ 0.42
Nek11Q8C0Q4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Nek11Q8C0Q4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nek11Q8C0Q4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nek11Q8C0Q4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nek11Q8C0Q4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nek11Q8C0Q4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nek11Q8C0Q4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nek11Q8C0Q4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.7■□□□□ 0.42
Nek11Q8C0Q4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
Nek11Q8C0Q4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nek11Q8C0Q4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nek11Q8C0Q4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nek11Q8C0Q4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nek11Q8C0Q4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nek11Q8C0Q4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nek11Q8C0Q4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nek11Q8C0Q4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nek11Q8C0Q4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nek11Q8C0Q4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Rpph1-201ENSMUST00000175096 319 ntBASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek11Q8C0Q4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek11Q8C0Q4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek11Q8C0Q4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek11Q8C0Q4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek11Q8C0Q4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
Nek11Q8C0Q4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek11Q8C0Q4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms