Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Usp47Q8BY87 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp47Q8BY87 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp47Q8BY87 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC21.02■□□□□ 0.96
Usp47Q8BY87 Gm37230-201ENSMUST00000194491 818 ntBASIC21.02■□□□□ 0.96
Usp47Q8BY87 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC21.02■□□□□ 0.96
Usp47Q8BY87 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Usp47Q8BY87 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp47Q8BY87 Efs-202ENSMUST00000227037 2540 ntBASIC21.02■□□□□ 0.96
Usp47Q8BY87 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usp47Q8BY87 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp47Q8BY87 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp47Q8BY87 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Usp47Q8BY87 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp47Q8BY87 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC21.01■□□□□ 0.95
Usp47Q8BY87 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC21.01■□□□□ 0.95
Usp47Q8BY87 Gm9726-201ENSMUST00000180321 678 ntBASIC21.01■□□□□ 0.95
Usp47Q8BY87 Gm6944-201ENSMUST00000182449 1006 ntBASIC21.01■□□□□ 0.95
Usp47Q8BY87 AC159114.1-201ENSMUST00000220349 266 ntBASIC21.01■□□□□ 0.95
Usp47Q8BY87 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp47Q8BY87 Gm6756-201ENSMUST00000180647 1620 ntBASIC21■□□□□ 0.95
Usp47Q8BY87 Gm42466-201ENSMUST00000202099 1301 ntBASIC21■□□□□ 0.95
Usp47Q8BY87 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC21■□□□□ 0.95
Usp47Q8BY87 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC21■□□□□ 0.95
Usp47Q8BY87 Gm18049-201ENSMUST00000208909 581 ntBASIC21■□□□□ 0.95
Usp47Q8BY87 AC158529.1-201ENSMUST00000223618 239 ntBASIC21■□□□□ 0.95
Usp47Q8BY87 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp47Q8BY87 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp47Q8BY87 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Usp47Q8BY87 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Usp47Q8BY87 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp47Q8BY87 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp47Q8BY87 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Usp47Q8BY87 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp47Q8BY87 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Usp47Q8BY87 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC21■□□□□ 0.95
Usp47Q8BY87 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp47Q8BY87 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Usp47Q8BY87 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC21■□□□□ 0.95
Usp47Q8BY87 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Usp47Q8BY87 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp47Q8BY87 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp47Q8BY87 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp47Q8BY87 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp47Q8BY87 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp47Q8BY87 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp47Q8BY87 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Gm18766-201ENSMUST00000189811 808 ntBASIC20.99■□□□□ 0.95
Usp47Q8BY87 Gm10576-201ENSMUST00000191927 825 ntBASIC20.99■□□□□ 0.95
Usp47Q8BY87 Gm37277-201ENSMUST00000194052 1111 ntBASIC20.99■□□□□ 0.95
Usp47Q8BY87 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Rbfox2-208ENSMUST00000227930 1218 ntBASIC20.99■□□□□ 0.95
Usp47Q8BY87 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp47Q8BY87 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Usp47Q8BY87 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Gm6415-201ENSMUST00000118488 348 ntBASIC20.98■□□□□ 0.95
Usp47Q8BY87 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC20.98■□□□□ 0.95
Usp47Q8BY87 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms