Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Efs-202ENSMUST00000227037 2540 ntBASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Psmb5-202ENSMUST00000227257 622 ntBASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4Q8BQZ5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4Q8BQZ5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Gm45167-201ENSMUST00000208007 322 ntBASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms