Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Gm18622-201ENSMUST00000219361 595 ntBASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Gm43347-201ENSMUST00000200226 580 ntBASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ckap4Q8BMK4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Gm8097-201ENSMUST00000117903 829 ntBASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ckap4Q8BMK4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Gm14722-201ENSMUST00000118943 689 ntBASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms