Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Gm15794-201ENSMUST00000120182 631 ntBASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Gm14859-201ENSMUST00000117752 357 ntBASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Gm27704-201ENSMUST00000185094 107 ntBASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Prpf18Q8BM39 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.24□□□□□ -0.13
Prpf18Q8BM39 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Gm27742-201ENSMUST00000184667 60 ntBASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms