Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Chmp2bQ8BJF9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp2bQ8BJF9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp2bQ8BJF9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp2bQ8BJF9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
Chmp2bQ8BJF9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Gm14859-201ENSMUST00000117752 357 ntBASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2bQ8BJF9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Gm12134-201ENSMUST00000122109 520 ntBASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Gm27646-201ENSMUST00000183989 110 ntBASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms