Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf38Q8BI21 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf38Q8BI21 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf38Q8BI21 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf38Q8BI21 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
Rnf38Q8BI21 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf38Q8BI21 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf38Q8BI21 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Gm23547-201ENSMUST00000158210 271 ntBASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.44□□□□□ -0.1
Rnf38Q8BI21 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf38Q8BI21 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.44□□□□□ -0.1
Rnf38Q8BI21 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Gm17971-201ENSMUST00000190239 806 ntBASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Birc2-201ENSMUST00000054878 378 ntBASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms