Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.28□□□□□ -0.12
Vrk1Q80X41 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vrk1Q80X41 App-207ENSMUST00000227737 2827 ntBASIC14.28□□□□□ -0.12
Vrk1Q80X41 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vrk1Q80X41 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vrk1Q80X41 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vrk1Q80X41 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vrk1Q80X41 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vrk1Q80X41 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vrk1Q80X41 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vrk1Q80X41 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.27□□□□□ -0.12
Vrk1Q80X41 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vrk1Q80X41 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vrk1Q80X41 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vrk1Q80X41 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vrk1Q80X41 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vrk1Q80X41 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vrk1Q80X41 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.27□□□□□ -0.12
Vrk1Q80X41 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.27□□□□□ -0.12
Vrk1Q80X41 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vrk1Q80X41 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Gm2810-201ENSMUST00000118681 990 ntBASIC14.27□□□□□ -0.13
Vrk1Q80X41 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.27□□□□□ -0.13
Vrk1Q80X41 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.27□□□□□ -0.13
Vrk1Q80X41 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Vrk1Q80X41 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.26□□□□□ -0.13
Vrk1Q80X41 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.26□□□□□ -0.13
Vrk1Q80X41 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vrk1Q80X41 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vrk1Q80X41 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vrk1Q80X41 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vrk1Q80X41 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vrk1Q80X41 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vrk1Q80X41 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Vrk1Q80X41 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vrk1Q80X41 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vrk1Q80X41 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vrk1Q80X41 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vrk1Q80X41 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vrk1Q80X41 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms