Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc2Q80VA5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc2Q80VA5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc2Q80VA5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc2Q80VA5 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.28■□□□□ 0.2
Sh3tc2Q80VA5 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc2Q80VA5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc2Q80VA5 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc2Q80VA5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc2Q80VA5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc2Q80VA5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc2Q80VA5 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Gm6973-201ENSMUST00000117080 721 ntBASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Gm6415-201ENSMUST00000118488 348 ntBASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Gm13823-201ENSMUST00000119930 345 ntBASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc2Q80VA5 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Sh3tc2Q80VA5 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc2Q80VA5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc2Q80VA5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc2Q80VA5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc2Q80VA5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc2Q80VA5 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc2Q80VA5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc2Q80VA5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Gm27989-201ENSMUST00000184721 107 ntBASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc2Q80VA5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3tc2Q80VA5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.25■□□□□ 0.19
Sh3tc2Q80VA5 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Sh3tc2Q80VA5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3tc2Q80VA5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Sh3tc2Q80VA5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3tc2Q80VA5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3tc2Q80VA5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3tc2Q80VA5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3tc2Q80VA5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3tc2Q80VA5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Sh3tc2Q80VA5 Asic1-205ENSMUST00000228185 1818 ntBASIC16.25■□□□□ 0.19
Sh3tc2Q80VA5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Sh3tc2Q80VA5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3tc2Q80VA5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Sh3tc2Q80VA5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms