Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ush1gQ80T11 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ush1gQ80T11 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ush1gQ80T11 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ush1gQ80T11 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.34■□□□□ 0.21
Ush1gQ80T11 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.34■□□□□ 0.21
Ush1gQ80T11 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.34■□□□□ 0.21
Ush1gQ80T11 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ush1gQ80T11 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.34■□□□□ 0.21
Ush1gQ80T11 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.33■□□□□ 0.21
Ush1gQ80T11 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ush1gQ80T11 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ush1gQ80T11 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ush1gQ80T11 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Ush1gQ80T11 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ush1gQ80T11 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Gm5745-201ENSMUST00000183748 313 ntBASIC16.33■□□□□ 0.2
Ush1gQ80T11 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.33■□□□□ 0.2
Ush1gQ80T11 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1gQ80T11 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.32■□□□□ 0.2
Ush1gQ80T11 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Gm27437-201ENSMUST00000183429 107 ntBASIC16.32■□□□□ 0.2
Ush1gQ80T11 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Gm5779-201ENSMUST00000218467 910 ntBASIC16.32■□□□□ 0.2
Ush1gQ80T11 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1gQ80T11 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms