Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Gm9229-201ENSMUST00000222777 126 ntBASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx55Q6ZPL9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Gm37917-201ENSMUST00000194711 392 ntBASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx55Q6ZPL9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx55Q6ZPL9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ddx55Q6ZPL9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Gm10766-202ENSMUST00000194123 606 ntBASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx55Q6ZPL9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms