Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.3■□□□□ 0.36
Slc44a1Q6X893 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc44a1Q6X893 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc44a1Q6X893 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc44a1Q6X893 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc44a1Q6X893 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.3■□□□□ 0.36
Slc44a1Q6X893 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc44a1Q6X893 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc44a1Q6X893 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Slc44a1Q6X893 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.3■□□□□ 0.36
Slc44a1Q6X893 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc44a1Q6X893 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc44a1Q6X893 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc44a1Q6X893 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc44a1Q6X893 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc44a1Q6X893 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc44a1Q6X893 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Gm14822-201ENSMUST00000122247 291 ntBASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Mir1895-201ENSMUST00000122615 79 ntBASIC17.29■□□□□ 0.36
Slc44a1Q6X893 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc44a1Q6X893 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Sybu-209ENSMUST00000228639 4113 ntBASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Gm11745-201ENSMUST00000121669 448 ntBASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc44a1Q6X893 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Gm27702-201ENSMUST00000184512 56 ntBASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Gm2451-201ENSMUST00000199447 999 ntBASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Gm10290-201ENSMUST00000200451 999 ntBASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Gm18057-201ENSMUST00000208220 503 ntBASIC17.27■□□□□ 0.36
Slc44a1Q6X893 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc44a1Q6X893 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc44a1Q6X893 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Slc44a1Q6X893 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc44a1Q6X893 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Slc44a1Q6X893 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms