Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufa4Q62425 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufa4Q62425 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufa4Q62425 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufa4Q62425 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufa4Q62425 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Ndufa4Q62425 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufa4Q62425 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufa4Q62425 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufa4Q62425 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufa4Q62425 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufa4Q62425 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.85□□□□□ -0.67
Ndufa4Q62425 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufa4Q62425 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufa4Q62425 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufa4Q62425 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufa4Q62425 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ndufa4Q62425 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.84□□□□□ -0.67
Ndufa4Q62425 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Mir770-201ENSMUST00000103252 94 ntBASIC10.84□□□□□ -0.67
Ndufa4Q62425 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Gm22697-201ENSMUST00000175194 63 ntBASIC10.84□□□□□ -0.67
Ndufa4Q62425 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Gm18101-201ENSMUST00000215769 548 ntBASIC10.84□□□□□ -0.67
Ndufa4Q62425 CT025689.6-201ENSMUST00000224991 1104 ntBASIC10.84□□□□□ -0.67
Ndufa4Q62425 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufa4Q62425 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Ndufa4Q62425 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Gm12669-201ENSMUST00000122162 1009 ntBASIC10.83□□□□□ -0.68
Ndufa4Q62425 Gm37055-201ENSMUST00000191866 133 ntBASIC10.83□□□□□ -0.68
Ndufa4Q62425 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.83□□□□□ -0.68
Ndufa4Q62425 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms