Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ctr9Q62018 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.6■□□□□ 0.41
Ctr9Q62018 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ctr9Q62018 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.59■□□□□ 0.41
Ctr9Q62018 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.59■□□□□ 0.41
Ctr9Q62018 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.59■□□□□ 0.41
Ctr9Q62018 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Ctr9Q62018 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.59■□□□□ 0.41
Ctr9Q62018 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.59■□□□□ 0.41
Ctr9Q62018 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.59■□□□□ 0.41
Ctr9Q62018 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.59■□□□□ 0.41
Ctr9Q62018 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Ctr9Q62018 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ctr9Q62018 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ctr9Q62018 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ctr9Q62018 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.58■□□□□ 0.41
Ctr9Q62018 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ctr9Q62018 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ctr9Q62018 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ctr9Q62018 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ctr9Q62018 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Ctr9Q62018 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctr9Q62018 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.58■□□□□ 0.4
Ctr9Q62018 Gm6973-201ENSMUST00000117080 721 ntBASIC17.58■□□□□ 0.4
Ctr9Q62018 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.58■□□□□ 0.4
Ctr9Q62018 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.58■□□□□ 0.4
Ctr9Q62018 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctr9Q62018 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ctr9Q62018 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.58■□□□□ 0.4
Ctr9Q62018 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctr9Q62018 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctr9Q62018 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctr9Q62018 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.58■□□□□ 0.4
Ctr9Q62018 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ctr9Q62018 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctr9Q62018 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ctr9Q62018 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.57■□□□□ 0.4
Ctr9Q62018 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ctr9Q62018 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Asic1-205ENSMUST00000228185 1818 ntBASIC17.57■□□□□ 0.4
Ctr9Q62018 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.57■□□□□ 0.4
Ctr9Q62018 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.57■□□□□ 0.4
Ctr9Q62018 Gm43474-201ENSMUST00000196415 774 ntBASIC17.57■□□□□ 0.4
Ctr9Q62018 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Ctr9Q62018 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ctr9Q62018 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.57■□□□□ 0.4
Ctr9Q62018 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.57■□□□□ 0.4
Ctr9Q62018 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctr9Q62018 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms