Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gli3Q61602 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC19.83■□□□□ 0.76
Gli3Q61602 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gli3Q61602 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gli3Q61602 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.82■□□□□ 0.76
Gli3Q61602 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gli3Q61602 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gli3Q61602 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gli3Q61602 Gm22323-201ENSMUST00000103832 109 ntBASIC19.82■□□□□ 0.76
Gli3Q61602 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gli3Q61602 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gli3Q61602 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC19.82■□□□□ 0.76
Gli3Q61602 Gm22331-201ENSMUST00000158066 136 ntBASIC19.82■□□□□ 0.76
Gli3Q61602 Gm9182-201ENSMUST00000217829 639 ntBASIC19.82■□□□□ 0.76
Gli3Q61602 Gm17823-201ENSMUST00000217830 1006 ntBASIC19.82■□□□□ 0.76
Gli3Q61602 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.82■□□□□ 0.76
Gli3Q61602 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gli3Q61602 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gli3Q61602 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gli3Q61602 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gli3Q61602 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gli3Q61602 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gli3Q61602 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Gli3Q61602 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gli3Q61602 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gli3Q61602 Gm43138-201ENSMUST00000199123 708 ntBASIC19.81■□□□□ 0.76
Gli3Q61602 Gm29787-201ENSMUST00000222129 849 ntBASIC19.81■□□□□ 0.76
Gli3Q61602 AC139350.3-201ENSMUST00000226151 420 ntBASIC19.81■□□□□ 0.76
Gli3Q61602 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC19.81■□□□□ 0.76
Gli3Q61602 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gli3Q61602 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.81■□□□□ 0.76
Gli3Q61602 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gli3Q61602 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gli3Q61602 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC19.8■□□□□ 0.76
Gli3Q61602 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Gli3Q61602 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC19.8■□□□□ 0.76
Gli3Q61602 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC19.8■□□□□ 0.76
Gli3Q61602 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Gm6283-201ENSMUST00000182369 1000 ntBASIC19.8■□□□□ 0.76
Gli3Q61602 Gm27341-201ENSMUST00000183570 106 ntBASIC19.8■□□□□ 0.76
Gli3Q61602 Gm43818-201ENSMUST00000200605 466 ntBASIC19.8■□□□□ 0.76
Gli3Q61602 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Gm43289-201ENSMUST00000200537 1475 ntBASIC19.8■□□□□ 0.76
Gli3Q61602 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC19.8■□□□□ 0.76
Gli3Q61602 AC113441.2-201ENSMUST00000221538 1468 ntBASIC19.8■□□□□ 0.76
Gli3Q61602 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gli3Q61602 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gli3Q61602 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC19.79■□□□□ 0.76
Gli3Q61602 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Gli3Q61602 Olfr284-202ENSMUST00000206647 966 ntBASIC19.79■□□□□ 0.76
Gli3Q61602 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC19.79■□□□□ 0.76
Gli3Q61602 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gli3Q61602 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gli3Q61602 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gli3Q61602 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gli3Q61602 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gli3Q61602 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gli3Q61602 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gli3Q61602 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gli3Q61602 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gli3Q61602 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Gli3Q61602 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gli3Q61602 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gli3Q61602 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
Gli3Q61602 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Gli3Q61602 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gli3Q61602 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gli3Q61602 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC19.78■□□□□ 0.76
Gli3Q61602 Gm21470-201ENSMUST00000187680 696 ntBASIC19.78■□□□□ 0.76
Gli3Q61602 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC19.78■□□□□ 0.76
Gli3Q61602 Gm6334-201ENSMUST00000207083 228 ntBASIC19.78■□□□□ 0.76
Gli3Q61602 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC19.78■□□□□ 0.76
Gli3Q61602 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gli3Q61602 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gli3Q61602 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Gli3Q61602 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gli3Q61602 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC19.78■□□□□ 0.76
Gli3Q61602 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gli3Q61602 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gli3Q61602 Trav13-3-201ENSMUST00000117226 336 ntBASIC19.78■□□□□ 0.76
Gli3Q61602 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC19.78■□□□□ 0.76
Gli3Q61602 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC19.78■□□□□ 0.76
Gli3Q61602 Gm5363-201ENSMUST00000211927 938 ntBASIC19.78■□□□□ 0.76
Gli3Q61602 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Gli3Q61602 AC123645.1-201ENSMUST00000228469 605 ntBASIC19.78■□□□□ 0.76
Gli3Q61602 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gli3Q61602 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms