Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Six4Q61321 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.07■□□□□ 0
Six4Q61321 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Six4Q61321 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Six4Q61321 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.07■□□□□ 0
Six4Q61321 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Six4Q61321 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Six4Q61321 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Six4Q61321 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Six4Q61321 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Six4Q61321 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.06■□□□□ 0
Six4Q61321 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.06■□□□□ 0
Six4Q61321 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.06■□□□□ 0
Six4Q61321 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.06■□□□□ 0
Six4Q61321 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Six4Q61321 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Six4Q61321 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Six4Q61321 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.05■□□□□ 0
Six4Q61321 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Six4Q61321 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Six4Q61321 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Six4Q61321 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.05■□□□□ 0
Six4Q61321 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Six4Q61321 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Six4Q61321 Carlr-201ENSMUST00000181515 2574 ntBASIC15.05■□□□□ 0
Six4Q61321 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.05■□□□□ 0
Six4Q61321 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.05■□□□□ 0
Six4Q61321 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Six4Q61321 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.05■□□□□ -0
Six4Q61321 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.05■□□□□ -0
Six4Q61321 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.05■□□□□ -0
Six4Q61321 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.05■□□□□ -0
Six4Q61321 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Six4Q61321 Gm17271-201ENSMUST00000165535 355 ntBASIC15.05■□□□□ -0
Six4Q61321 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.05■□□□□ -0
Six4Q61321 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.05■□□□□ -0
Six4Q61321 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Six4Q61321 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Six4Q61321 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.05■□□□□ -0
Six4Q61321 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Six4Q61321 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Six4Q61321 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Six4Q61321 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Six4Q61321 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.05■□□□□ -0
Six4Q61321 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Six4Q61321 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Six4Q61321 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.05■□□□□ -0
Six4Q61321 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.05■□□□□ -0
Six4Q61321 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Six4Q61321 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Six4Q61321 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Six4Q61321 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Six4Q61321 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Six4Q61321 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Six4Q61321 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Six4Q61321 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Six4Q61321 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Six4Q61321 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Six4Q61321 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Six4Q61321 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Six4Q61321 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.04■□□□□ -0
Six4Q61321 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.04■□□□□ -0
Six4Q61321 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Six4Q61321 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Six4Q61321 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Six4Q61321 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.04■□□□□ -0
Six4Q61321 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Six4Q61321 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Six4Q61321 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.04■□□□□ -0
Six4Q61321 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Six4Q61321 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.04■□□□□ -0
Six4Q61321 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.04■□□□□ -0
Six4Q61321 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.04■□□□□ -0
Six4Q61321 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.04■□□□□ -0
Six4Q61321 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms