Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Xrcc1Q60596 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Xrcc1Q60596 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Xrcc1Q60596 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Xrcc1Q60596 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Xrcc1Q60596 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Xrcc1Q60596 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Xrcc1Q60596 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Xrcc1Q60596 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Xrcc1Q60596 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Xrcc1Q60596 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Xrcc1Q60596 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.29□□□□□ -0.12
Xrcc1Q60596 Gm9385-201ENSMUST00000117563 472 ntBASIC14.29□□□□□ -0.12
Xrcc1Q60596 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.29□□□□□ -0.12
Xrcc1Q60596 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Xrcc1Q60596 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.28□□□□□ -0.12
Xrcc1Q60596 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Gm43767-201ENSMUST00000198933 381 ntBASIC14.28□□□□□ -0.12
Xrcc1Q60596 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.28□□□□□ -0.12
Xrcc1Q60596 Gm10154-201ENSMUST00000084445 354 ntBASIC14.28□□□□□ -0.12
Xrcc1Q60596 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Xrcc1Q60596 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Xrcc1Q60596 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Xrcc1Q60596 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Xrcc1Q60596 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.27□□□□□ -0.12
Xrcc1Q60596 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Xrcc1Q60596 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Xrcc1Q60596 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
Xrcc1Q60596 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Xrcc1Q60596 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Xrcc1Q60596 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Xrcc1Q60596 Gm15427-201ENSMUST00000117288 531 ntBASIC14.27□□□□□ -0.13
Xrcc1Q60596 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.27□□□□□ -0.13
Xrcc1Q60596 Gm2213-201ENSMUST00000197485 688 ntBASIC14.27□□□□□ -0.13
Xrcc1Q60596 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.27□□□□□ -0.13
Xrcc1Q60596 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.27□□□□□ -0.13
Xrcc1Q60596 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.27□□□□□ -0.13
Xrcc1Q60596 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Xrcc1Q60596 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms