Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.92■□□□□ 0.14
Shroom1Q5SX79 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Shroom1Q5SX79 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Shroom1Q5SX79 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom1Q5SX79 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Mir449b-201ENSMUST00000104833 80 ntBASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Gm25948-201ENSMUST00000175334 112 ntBASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom1Q5SX79 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms