Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Gm3375-201ENSMUST00000203929 796 ntBASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Gm715-201ENSMUST00000117865 831 ntBASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-3Q5R1C3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Gm13186-201ENSMUST00000118031 316 ntBASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Gm10653-202ENSMUST00000139570 835 ntBASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms