Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Gm13015-201ENSMUST00000118674 204 ntBASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rc3h1Q4VGL6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Gm38225-201ENSMUST00000194001 393 ntBASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rc3h1Q4VGL6 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Asic1-205ENSMUST00000228185 1818 ntBASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Gm29541-201ENSMUST00000191351 678 ntBASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms