Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Prpf38aQ4FK66 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Gm15693-201ENSMUST00000120470 637 ntBASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Gm9824-201ENSMUST00000178707 561 ntBASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
Prpf38aQ4FK66 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.4■□□□□ 0.38
Prpf38aQ4FK66 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Prpf38aQ4FK66 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Prpf38aQ4FK66 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Prpf38aQ4FK66 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Prpf38aQ4FK66 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Prpf38aQ4FK66 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf38aQ4FK66 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf38aQ4FK66 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf38aQ4FK66 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Prpf38aQ4FK66 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf38aQ4FK66 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf38aQ4FK66 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf38aQ4FK66 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf38aQ4FK66 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Prpf38aQ4FK66 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Prpf38aQ4FK66 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf38aQ4FK66 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms