Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Gm4995-201ENSMUST00000117247 432 ntBASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Carlr-201ENSMUST00000181515 2574 ntBASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap2Q3V1H1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.1■□□□□ 0.33
Ckap2Q3V1H1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ckap2Q3V1H1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Ckap2Q3V1H1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap2Q3V1H1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap2Q3V1H1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap2Q3V1H1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap2Q3V1H1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap2Q3V1H1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.09■□□□□ 0.33
Ckap2Q3V1H1 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.09■□□□□ 0.33
Ckap2Q3V1H1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap2Q3V1H1 Gm2451-201ENSMUST00000199447 999 ntBASIC17.09■□□□□ 0.33
Ckap2Q3V1H1 Gm10290-201ENSMUST00000200451 999 ntBASIC17.09■□□□□ 0.33
Ckap2Q3V1H1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap2Q3V1H1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap2Q3V1H1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms