Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Naf1Q3UMQ8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Naf1Q3UMQ8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Gm15920-201ENSMUST00000118998 402 ntBASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Gm15483-201ENSMUST00000120338 456 ntBASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Mir6956-201ENSMUST00000183598 62 ntBASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Naf1Q3UMQ8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Gm25948-201ENSMUST00000175334 112 ntBASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms