Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf180Q3U827 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.35■□□□□ 0.37
Rnf180Q3U827 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf180Q3U827 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC17.34■□□□□ 0.37
Rnf180Q3U827 Gm22018-201ENSMUST00000104357 131 ntBASIC17.34■□□□□ 0.37
Rnf180Q3U827 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Gm22334-201ENSMUST00000158070 133 ntBASIC17.34■□□□□ 0.37
Rnf180Q3U827 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Mir6979-201ENSMUST00000183927 56 ntBASIC17.34■□□□□ 0.37
Rnf180Q3U827 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Gm42997-202ENSMUST00000200321 985 ntBASIC17.34■□□□□ 0.37
Rnf180Q3U827 Gm8099-201ENSMUST00000200510 742 ntBASIC17.34■□□□□ 0.37
Rnf180Q3U827 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC17.34■□□□□ 0.37
Rnf180Q3U827 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC17.34■□□□□ 0.37
Rnf180Q3U827 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.34■□□□□ 0.37
Rnf180Q3U827 Gm9826-201ENSMUST00000029124 1299 ntBASIC17.34■□□□□ 0.37
Rnf180Q3U827 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf180Q3U827 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf180Q3U827 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Rnf180Q3U827 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf180Q3U827 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf180Q3U827 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf180Q3U827 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf180Q3U827 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Rnf180Q3U827 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.33■□□□□ 0.37
Rnf180Q3U827 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Gm22323-201ENSMUST00000103832 109 ntBASIC17.33■□□□□ 0.36
Rnf180Q3U827 Gm4993-201ENSMUST00000118719 1174 ntBASIC17.33■□□□□ 0.36
Rnf180Q3U827 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.33■□□□□ 0.36
Rnf180Q3U827 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.33■□□□□ 0.36
Rnf180Q3U827 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.33■□□□□ 0.36
Rnf180Q3U827 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.33■□□□□ 0.36
Rnf180Q3U827 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf180Q3U827 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf180Q3U827 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.32■□□□□ 0.36
Rnf180Q3U827 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Ighv1-62-201ENSMUST00000193406 350 ntBASIC17.32■□□□□ 0.36
Rnf180Q3U827 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.32■□□□□ 0.36
Rnf180Q3U827 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf180Q3U827 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf180Q3U827 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf180Q3U827 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf180Q3U827 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf180Q3U827 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf180Q3U827 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf180Q3U827 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf180Q3U827 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf180Q3U827 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf180Q3U827 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.31■□□□□ 0.36
Rnf180Q3U827 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC17.31■□□□□ 0.36
Rnf180Q3U827 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rnf180Q3U827 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf180Q3U827 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf180Q3U827 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf180Q3U827 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.31■□□□□ 0.36
Rnf180Q3U827 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf180Q3U827 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms