Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Gm25990-201ENSMUST00000102440 86 ntBASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cul4aQ3TCH7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cul4aQ3TCH7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cul4aQ3TCH7 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cul4aQ3TCH7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cul4aQ3TCH7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.69■□□□□ 0.1
Cul4aQ3TCH7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms