Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.7□□□□□ -0.06
Q3KNL4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.7□□□□□ -0.06
Q3KNL4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Q3KNL4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.7□□□□□ -0.06
Q3KNL4 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.7□□□□□ -0.06
Q3KNL4 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.7□□□□□ -0.06
Q3KNL4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.7□□□□□ -0.06
Q3KNL4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.7□□□□□ -0.06
Q3KNL4 Gm6296-201ENSMUST00000222599 943 ntBASIC14.7□□□□□ -0.06
Q3KNL4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.7□□□□□ -0.06
Q3KNL4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Q3KNL4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Q3KNL4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
Q3KNL4 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.7□□□□□ -0.06
Q3KNL4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.69□□□□□ -0.06
Q3KNL4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.69□□□□□ -0.06
Q3KNL4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.69□□□□□ -0.06
Q3KNL4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.69□□□□□ -0.06
Q3KNL4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.69□□□□□ -0.06
Q3KNL4 Gm27646-201ENSMUST00000183989 110 ntBASIC14.69□□□□□ -0.06
Q3KNL4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.69□□□□□ -0.06
Q3KNL4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Q3KNL4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.69□□□□□ -0.06
Q3KNL4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Q3KNL4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Q3KNL4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Q3KNL4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.69□□□□□ -0.06
Q3KNL4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Q3KNL4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Q3KNL4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Q3KNL4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Q3KNL4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Q3KNL4 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Q3KNL4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Q3KNL4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Q3KNL4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Q3KNL4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Q3KNL4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Q3KNL4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.68□□□□□ -0.06
Q3KNL4 Gm10499-201ENSMUST00000174094 934 ntBASIC14.68□□□□□ -0.06
Q3KNL4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
Q3KNL4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Q3KNL4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.68□□□□□ -0.06
Q3KNL4 Gm4535-201ENSMUST00000182274 558 ntBASIC14.68□□□□□ -0.06
Q3KNL4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Q3KNL4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Q3KNL4 Gm10355-201ENSMUST00000097146 517 ntBASIC14.68□□□□□ -0.06
Q3KNL4 Celf4-206ENSMUST00000224553 1729 ntBASIC14.68□□□□□ -0.06
Q3KNL4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Q3KNL4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Q3KNL4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Q3KNL4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Q3KNL4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Q3KNL4 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.68□□□□□ -0.06
Q3KNL4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Q3KNL4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Q3KNL4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms