Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Lig3P97386 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.33■□□□□ 0.2
Lig3P97386 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.33■□□□□ 0.2
Lig3P97386 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.33■□□□□ 0.2
Lig3P97386 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.33■□□□□ 0.2
Lig3P97386 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lig3P97386 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.32■□□□□ 0.2
Lig3P97386 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.32■□□□□ 0.2
Lig3P97386 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lig3P97386 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.32■□□□□ 0.2
Lig3P97386 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lig3P97386 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.32■□□□□ 0.2
Lig3P97386 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.32■□□□□ 0.2
Lig3P97386 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Lig3P97386 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lig3P97386 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Lig3P97386 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Lig3P97386 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.31■□□□□ 0.2
Lig3P97386 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.31■□□□□ 0.2
Lig3P97386 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.31■□□□□ 0.2
Lig3P97386 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.31■□□□□ 0.2
Lig3P97386 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lig3P97386 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lig3P97386 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.31■□□□□ 0.2
Lig3P97386 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.31■□□□□ 0.2
Lig3P97386 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lig3P97386 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lig3P97386 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lig3P97386 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lig3P97386 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lig3P97386 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
Lig3P97386 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lig3P97386 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lig3P97386 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lig3P97386 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lig3P97386 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.3■□□□□ 0.2
Lig3P97386 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.3■□□□□ 0.2
Lig3P97386 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.3■□□□□ 0.2
Lig3P97386 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.3■□□□□ 0.2
Lig3P97386 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.3■□□□□ 0.2
Lig3P97386 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lig3P97386 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lig3P97386 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lig3P97386 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lig3P97386 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms