Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-3P97334 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Gm42612-201ENSMUST00000197986 623 ntBASIC18.69■□□□□ 0.58
Nkx2-3P97334 Gm43170-201ENSMUST00000199827 612 ntBASIC18.69■□□□□ 0.58
Nkx2-3P97334 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-3P97334 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nkx2-3P97334 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC18.68■□□□□ 0.58
Nkx2-3P97334 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.68■□□□□ 0.58
Nkx2-3P97334 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-3P97334 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.67■□□□□ 0.58
Nkx2-3P97334 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nkx2-3P97334 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.67■□□□□ 0.58
Nkx2-3P97334 Gm43438-201ENSMUST00000198133 379 ntBASIC18.67■□□□□ 0.58
Nkx2-3P97334 Gm45453-201ENSMUST00000211758 853 ntBASIC18.67■□□□□ 0.58
Nkx2-3P97334 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.67■□□□□ 0.58
Nkx2-3P97334 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-3P97334 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Gm12490-201ENSMUST00000120255 560 ntBASIC18.66■□□□□ 0.58
Nkx2-3P97334 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.66■□□□□ 0.58
Nkx2-3P97334 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.66■□□□□ 0.58
Nkx2-3P97334 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Gm9794-201ENSMUST00000202370 423 ntBASIC18.66■□□□□ 0.58
Nkx2-3P97334 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.66■□□□□ 0.58
Nkx2-3P97334 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-3P97334 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-3P97334 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-3P97334 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms