Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rad50P70388 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rad50P70388 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
Rad50P70388 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Rad50P70388 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rad50P70388 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rad50P70388 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rad50P70388 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Rad50P70388 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.93■□□□□ 0.46
Rad50P70388 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rad50P70388 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.93■□□□□ 0.46
Rad50P70388 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.93■□□□□ 0.46
Rad50P70388 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Rad50P70388 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.92■□□□□ 0.46
Rad50P70388 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Rad50P70388 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Rad50P70388 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.92■□□□□ 0.46
Rad50P70388 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.92■□□□□ 0.46
Rad50P70388 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 Chchd1-203ENSMUST00000224633 557 ntBASIC17.92■□□□□ 0.46
Rad50P70388 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.92■□□□□ 0.46
Rad50P70388 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rad50P70388 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.92■□□□□ 0.46
Rad50P70388 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rad50P70388 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rad50P70388 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.91■□□□□ 0.46
Rad50P70388 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.91■□□□□ 0.46
Rad50P70388 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Rad50P70388 Gm11025-201ENSMUST00000140773 466 ntBASIC17.91■□□□□ 0.46
Rad50P70388 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.91■□□□□ 0.46
Rad50P70388 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.91■□□□□ 0.46
Rad50P70388 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.91■□□□□ 0.46
Rad50P70388 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rad50P70388 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.91■□□□□ 0.46
Rad50P70388 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rad50P70388 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rad50P70388 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rad50P70388 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.9■□□□□ 0.46
Rad50P70388 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rad50P70388 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rad50P70388 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rad50P70388 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rad50P70388 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rad50P70388 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rad50P70388 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rad50P70388 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.9■□□□□ 0.46
Rad50P70388 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.9■□□□□ 0.46
Rad50P70388 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Rad50P70388 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rad50P70388 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rad50P70388 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.9■□□□□ 0.46
Rad50P70388 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rad50P70388 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rad50P70388 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rad50P70388 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.9■□□□□ 0.46
Rad50P70388 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rad50P70388 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.9■□□□□ 0.46
Rad50P70388 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rad50P70388 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rad50P70388 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rad50P70388 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rad50P70388 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rad50P70388 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rad50P70388 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rad50P70388 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rad50P70388 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms