Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rps28P62858 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC8.8□□□□□ -1
Rps28P62858 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Rps28P62858 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Rps28P62858 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rps28P62858 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC8.79□□□□□ -1
Rps28P62858 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rps28P62858 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Gm10548-201ENSMUST00000097631 2629 ntBASIC8.79□□□□□ -1
Rps28P62858 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Rps28P62858 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
Rps28P62858 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC8.78□□□□□ -1
Rps28P62858 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Rps28P62858 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC8.78□□□□□ -1
Rps28P62858 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Gm7104-201ENSMUST00000179741 2532 ntBASIC8.78□□□□□ -1
Rps28P62858 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC8.78□□□□□ -1
Rps28P62858 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Gm29791-202ENSMUST00000207888 369 ntBASIC8.78□□□□□ -1
Rps28P62858 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Gm37600-201ENSMUST00000193764 3292 ntBASIC8.78□□□□□ -1
Rps28P62858 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC8.78□□□□□ -1
Rps28P62858 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
Rps28P62858 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC8.78□□□□□ -1
Rps28P62858 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC8.78□□□□□ -1
Rps28P62858 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC8.78□□□□□ -1
Rps28P62858 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC8.78□□□□□ -1
Rps28P62858 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Rps28P62858 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC8.78□□□□□ -1
Rps28P62858 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
Rps28P62858 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Rps28P62858 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Rps28P62858 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Rps28P62858 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms