Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a1P61620 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sec61a1P61620 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a1P61620 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.19□□□□□ -0.3
Sec61a1P61620 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.18□□□□□ -0.3
Sec61a1P61620 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Sec61a1P61620 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sec61a1P61620 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sec61a1P61620 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sec61a1P61620 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sec61a1P61620 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.18□□□□□ -0.3
Sec61a1P61620 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Sec61a1P61620 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.18□□□□□ -0.3
Sec61a1P61620 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Sec61a1P61620 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Sec61a1P61620 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a1P61620 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.18□□□□□ -0.3
Sec61a1P61620 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sec61a1P61620 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Sec61a1P61620 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.17□□□□□ -0.3
Sec61a1P61620 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.17□□□□□ -0.3
Sec61a1P61620 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.17□□□□□ -0.3
Sec61a1P61620 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.17□□□□□ -0.3
Sec61a1P61620 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sec61a1P61620 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Sec61a1P61620 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a1P61620 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.16□□□□□ -0.3
Sec61a1P61620 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Sec61a1P61620 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.16□□□□□ -0.3
Sec61a1P61620 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sec61a1P61620 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.16□□□□□ -0.3
Sec61a1P61620 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Sec61a1P61620 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Sec61a1P61620 Gm4459-201ENSMUST00000118750 468 ntBASIC13.16□□□□□ -0.3
Sec61a1P61620 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.16□□□□□ -0.3
Sec61a1P61620 Gm25406-201ENSMUST00000157599 105 ntBASIC13.16□□□□□ -0.3
Sec61a1P61620 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Sec61a1P61620 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.16□□□□□ -0.3
Sec61a1P61620 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Sec61a1P61620 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.16□□□□□ -0.3
Sec61a1P61620 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms