Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.88■□□□□ 0.29
Rrp1P56183 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rrp1P56183 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp1P56183 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.88■□□□□ 0.29
Rrp1P56183 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp1P56183 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp1P56183 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp1P56183 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp1P56183 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rrp1P56183 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp1P56183 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp1P56183 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp1P56183 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp1P56183 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp1P56183 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp1P56183 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp1P56183 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp1P56183 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp1P56183 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.87■□□□□ 0.29
Rrp1P56183 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp1P56183 Gm11780-201ENSMUST00000136880 516 ntBASIC16.87■□□□□ 0.29
Rrp1P56183 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.87■□□□□ 0.29
Rrp1P56183 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp1P56183 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rrp1P56183 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp1P56183 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.87■□□□□ 0.29
Rrp1P56183 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp1P56183 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp1P56183 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp1P56183 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.87■□□□□ 0.29
Rrp1P56183 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp1P56183 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
Rrp1P56183 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp1P56183 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.87■□□□□ 0.29
Rrp1P56183 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp1P56183 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp1P56183 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp1P56183 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.86■□□□□ 0.29
Rrp1P56183 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp1P56183 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp1P56183 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp1P56183 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp1P56183 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.86■□□□□ 0.29
Rrp1P56183 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.86■□□□□ 0.29
Rrp1P56183 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.86■□□□□ 0.29
Rrp1P56183 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.86■□□□□ 0.29
Rrp1P56183 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.86■□□□□ 0.29
Rrp1P56183 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp1P56183 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp1P56183 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp1P56183 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp1P56183 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Rrp1P56183 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rrp1P56183 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp1P56183 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp1P56183 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp1P56183 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp1P56183 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp1P56183 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp1P56183 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.85■□□□□ 0.29
Rrp1P56183 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp1P56183 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp1P56183 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rrp1P56183 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.85■□□□□ 0.29
Rrp1P56183 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rrp1P56183 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp1P56183 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.85■□□□□ 0.29
Rrp1P56183 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp1P56183 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.85■□□□□ 0.29
Rrp1P56183 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rrp1P56183 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp1P56183 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp1P56183 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp1P56183 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rrp1P56183 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rrp1P56183 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp1P56183 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.85■□□□□ 0.29
Rrp1P56183 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp1P56183 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.85■□□□□ 0.29
Rrp1P56183 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Rrp1P56183 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp1P56183 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rrp1P56183 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.84■□□□□ 0.29
Rrp1P56183 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rrp1P56183 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp1P56183 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp1P56183 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rrp1P56183 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp1P56183 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rrp1P56183 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp1P56183 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.84■□□□□ 0.29
Rrp1P56183 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.84■□□□□ 0.29
Rrp1P56183 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.84■□□□□ 0.29
Rrp1P56183 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Rrp1P56183 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp1P56183 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp1P56183 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp1P56183 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp1P56183 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp1P56183 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms