Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Atxn1P54254 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Atxn1P54254 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.85□□□□□ -0.03
Atxn1P54254 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Atxn1P54254 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.84□□□□□ -0.03
Atxn1P54254 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Atxn1P54254 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.84□□□□□ -0.03
Atxn1P54254 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Atxn1P54254 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.84□□□□□ -0.03
Atxn1P54254 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.84□□□□□ -0.03
Atxn1P54254 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Atxn1P54254 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Atxn1P54254 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.84□□□□□ -0.03
Atxn1P54254 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Atxn1P54254 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Atxn1P54254 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atxn1P54254 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Atxn1P54254 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Atxn1P54254 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.83□□□□□ -0.03
Atxn1P54254 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Atxn1P54254 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Atxn1P54254 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
Atxn1P54254 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Atxn1P54254 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Atxn1P54254 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Atxn1P54254 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Atxn1P54254 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Atxn1P54254 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Gm6912-201ENSMUST00000117218 544 ntBASIC14.83□□□□□ -0.04
Atxn1P54254 Gm14928-201ENSMUST00000120198 477 ntBASIC14.83□□□□□ -0.04
Atxn1P54254 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.83□□□□□ -0.04
Atxn1P54254 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Atxn1P54254 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.83□□□□□ -0.04
Atxn1P54254 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Atxn1P54254 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Atxn1P54254 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.83□□□□□ -0.04
Atxn1P54254 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.83□□□□□ -0.04
Atxn1P54254 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atxn1P54254 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms