Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmga2P52927 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.73□□□□□ -0.37
Hmga2P52927 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmga2P52927 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmga2P52927 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmga2P52927 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.73□□□□□ -0.37
Hmga2P52927 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hmga2P52927 Gm8655-201ENSMUST00000221159 852 ntBASIC12.73□□□□□ -0.37
Hmga2P52927 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmga2P52927 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.73□□□□□ -0.37
Hmga2P52927 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.73□□□□□ -0.37
Hmga2P52927 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmga2P52927 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmga2P52927 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmga2P52927 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.73□□□□□ -0.37
Hmga2P52927 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmga2P52927 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmga2P52927 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Hmga2P52927 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmga2P52927 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmga2P52927 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmga2P52927 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.73□□□□□ -0.37
Hmga2P52927 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmga2P52927 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmga2P52927 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hmga2P52927 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Hmga2P52927 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.72□□□□□ -0.37
Hmga2P52927 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmga2P52927 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hmga2P52927 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Hmga2P52927 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Hmga2P52927 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Hmga2P52927 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hmga2P52927 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmga2P52927 Olfr129-201ENSMUST00000122318 993 ntBASIC12.72□□□□□ -0.37
Hmga2P52927 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 Gm25016-201ENSMUST00000158399 131 ntBASIC12.72□□□□□ -0.37
Hmga2P52927 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Hmga2P52927 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Hmga2P52927 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Hmga2P52927 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.72□□□□□ -0.37
Hmga2P52927 Gm10252-201ENSMUST00000209541 832 ntBASIC12.72□□□□□ -0.37
Hmga2P52927 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.72□□□□□ -0.37
Hmga2P52927 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.72□□□□□ -0.37
Hmga2P52927 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Hmga2P52927 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmga2P52927 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmga2P52927 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmga2P52927 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hmga2P52927 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmga2P52927 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmga2P52927 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmga2P52927 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmga2P52927 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmga2P52927 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.71□□□□□ -0.37
Hmga2P52927 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Hmga2P52927 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Hmga2P52927 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmga2P52927 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmga2P52927 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.71□□□□□ -0.37
Hmga2P52927 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.71□□□□□ -0.37
Hmga2P52927 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Hmga2P52927 Gm15165-201ENSMUST00000118140 502 ntBASIC12.71□□□□□ -0.37
Hmga2P52927 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmga2P52927 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.71□□□□□ -0.37
Hmga2P52927 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Hmga2P52927 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.71□□□□□ -0.37
Hmga2P52927 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.71□□□□□ -0.37
Hmga2P52927 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.71□□□□□ -0.37
Hmga2P52927 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmga2P52927 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmga2P52927 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmga2P52927 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmga2P52927 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmga2P52927 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Hmga2P52927 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmga2P52927 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmga2P52927 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmga2P52927 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmga2P52927 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmga2P52927 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Hmga2P52927 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmga2P52927 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmga2P52927 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmga2P52927 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms