Protein–RNA interactions for Protein: P52483

Ube2e3, Ubiquitin-conjugating enzyme E2 E3, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2e3P52483 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2e3P52483 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2e3P52483 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2e3P52483 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2e3P52483 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2e3P52483 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2e3P52483 Gm12008-201ENSMUST00000117791 755 ntBASIC14.34□□□□□ -0.11
Ube2e3P52483 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Ube2e3P52483 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ube2e3P52483 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.34□□□□□ -0.11
Ube2e3P52483 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.34□□□□□ -0.11
Ube2e3P52483 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2e3P52483 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2e3P52483 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2e3P52483 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ube2e3P52483 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2e3P52483 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2e3P52483 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2e3P52483 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2e3P52483 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2e3P52483 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2e3P52483 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Ube2e3P52483 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ube2e3P52483 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ube2e3P52483 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ube2e3P52483 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ube2e3P52483 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Ube2e3P52483 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Ube2e3P52483 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.33□□□□□ -0.12
Ube2e3P52483 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.33□□□□□ -0.12
Ube2e3P52483 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 Gm27300-201ENSMUST00000184085 97 ntBASIC14.33□□□□□ -0.12
Ube2e3P52483 Gm27335-201ENSMUST00000184758 97 ntBASIC14.33□□□□□ -0.12
Ube2e3P52483 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.33□□□□□ -0.12
Ube2e3P52483 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ube2e3P52483 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ube2e3P52483 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ube2e3P52483 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ube2e3P52483 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ube2e3P52483 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube2e3P52483 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ube2e3P52483 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ube2e3P52483 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.33□□□□□ -0.12
Ube2e3P52483 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.33□□□□□ -0.12
Ube2e3P52483 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Ube2e3P52483 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.32□□□□□ -0.12
Ube2e3P52483 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ube2e3P52483 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ube2e3P52483 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.32□□□□□ -0.12
Ube2e3P52483 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ube2e3P52483 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.32□□□□□ -0.12
Ube2e3P52483 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.32□□□□□ -0.12
Ube2e3P52483 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.32□□□□□ -0.12
Ube2e3P52483 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.32□□□□□ -0.12
Ube2e3P52483 Gm7461-201ENSMUST00000058918 827 ntBASIC14.32□□□□□ -0.12
Ube2e3P52483 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Ube2e3P52483 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ube2e3P52483 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.32□□□□□ -0.12
Ube2e3P52483 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ube2e3P52483 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube2e3P52483 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.31□□□□□ -0.12
Ube2e3P52483 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms