Protein–RNA interactions for Protein: P51670

Ccl9, C-C motif chemokine 9, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl9P51670 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl9P51670 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl9P51670 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl9P51670 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl9P51670 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccl9P51670 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl9P51670 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccl9P51670 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccl9P51670 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccl9P51670 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.13□□□□□ -0.31
Ccl9P51670 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.13□□□□□ -0.31
Ccl9P51670 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccl9P51670 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.13□□□□□ -0.31
Ccl9P51670 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccl9P51670 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ccl9P51670 Gm4535-201ENSMUST00000182274 558 ntBASIC13.13□□□□□ -0.31
Ccl9P51670 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.13□□□□□ -0.31
Ccl9P51670 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.13□□□□□ -0.31
Ccl9P51670 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Ccl9P51670 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Gm10355-201ENSMUST00000097146 517 ntBASIC13.13□□□□□ -0.31
Ccl9P51670 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ccl9P51670 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Ccl9P51670 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Ccl9P51670 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl9P51670 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Ccl9P51670 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Ccl9P51670 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccl9P51670 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccl9P51670 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ccl9P51670 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Gm11452-201ENSMUST00000122376 690 ntBASIC13.12□□□□□ -0.31
Ccl9P51670 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.12□□□□□ -0.31
Ccl9P51670 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.12□□□□□ -0.31
Ccl9P51670 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.12□□□□□ -0.31
Ccl9P51670 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Ccl9P51670 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccl9P51670 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccl9P51670 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Carlr-201ENSMUST00000181515 2574 ntBASIC13.12□□□□□ -0.31
Ccl9P51670 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccl9P51670 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccl9P51670 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl9P51670 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl9P51670 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms