Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.42□□□□□ -0.42
Nkx2-1P50220 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.41□□□□□ -0.42
Nkx2-1P50220 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.41□□□□□ -0.42
Nkx2-1P50220 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.41□□□□□ -0.42
Nkx2-1P50220 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.41□□□□□ -0.42
Nkx2-1P50220 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-1P50220 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-1P50220 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.4□□□□□ -0.42
Nkx2-1P50220 Gm6659-201ENSMUST00000174752 547 ntBASIC12.4□□□□□ -0.42
Nkx2-1P50220 Gm45328-201ENSMUST00000210942 917 ntBASIC12.4□□□□□ -0.42
Nkx2-1P50220 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.4□□□□□ -0.42
Nkx2-1P50220 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.4□□□□□ -0.42
Nkx2-1P50220 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-1P50220 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx2-1P50220 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm11950-201ENSMUST00000121615 838 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms