Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC9.74□□□□□ -0.85
Xcl1P47993 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC9.74□□□□□ -0.85
Xcl1P47993 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC9.73□□□□□ -0.85
Xcl1P47993 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC9.73□□□□□ -0.85
Xcl1P47993 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC9.73□□□□□ -0.85
Xcl1P47993 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC9.73□□□□□ -0.85
Xcl1P47993 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Xcl1P47993 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Xcl1P47993 Gm44981-201ENSMUST00000205549 1943 ntBASIC9.72□□□□□ -0.85
Xcl1P47993 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Gm11927-201ENSMUST00000118472 759 ntBASIC9.72□□□□□ -0.85
Xcl1P47993 Gm13234-201ENSMUST00000120010 747 ntBASIC9.72□□□□□ -0.85
Xcl1P47993 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC9.72□□□□□ -0.85
Xcl1P47993 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC9.72□□□□□ -0.85
Xcl1P47993 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Xcl1P47993 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Xcl1P47993 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC9.72□□□□□ -0.85
Xcl1P47993 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Gm6190-201ENSMUST00000220683 1374 ntBASIC9.72□□□□□ -0.85
Xcl1P47993 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC9.72□□□□□ -0.85
Xcl1P47993 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Xcl1P47993 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Xcl1P47993 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.85
Xcl1P47993 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.71□□□□□ -0.85
Xcl1P47993 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Xcl1P47993 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Xcl1P47993 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
Xcl1P47993 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Xcl1P47993 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Xcl1P47993 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Xcl1P47993 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Xcl1P47993 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Xcl1P47993 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Xcl1P47993 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms