Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm44771-201ENSMUST00000206975 626 ntBASIC13.69□□□□□ -0.22
Nkx2-2P42586 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.69□□□□□ -0.22
Nkx2-2P42586 Gm10154-201ENSMUST00000084445 354 ntBASIC13.69□□□□□ -0.22
Nkx2-2P42586 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.68□□□□□ -0.22
Nkx2-2P42586 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.68□□□□□ -0.22
Nkx2-2P42586 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Gm16026-204ENSMUST00000162652 683 ntBASIC13.68□□□□□ -0.22
Nkx2-2P42586 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Gm45747-201ENSMUST00000212203 999 ntBASIC13.68□□□□□ -0.22
Nkx2-2P42586 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.68□□□□□ -0.22
Nkx2-2P42586 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-2P42586 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Gm27301-201ENSMUST00000184012 127 ntBASIC13.67□□□□□ -0.22
Nkx2-2P42586 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-2P42586 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms