Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.31■□□□□ 0.04
Cxcl12P40224 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.31■□□□□ 0.04
Cxcl12P40224 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.31■□□□□ 0.04
Cxcl12P40224 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.31■□□□□ 0.04
Cxcl12P40224 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.31■□□□□ 0.04
Cxcl12P40224 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cxcl12P40224 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.31■□□□□ 0.04
Cxcl12P40224 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cxcl12P40224 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Cxcl12P40224 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cxcl12P40224 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cxcl12P40224 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.3■□□□□ 0.04
Cxcl12P40224 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.3■□□□□ 0.04
Cxcl12P40224 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.3■□□□□ 0.04
Cxcl12P40224 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.3■□□□□ 0.04
Cxcl12P40224 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.3■□□□□ 0.04
Cxcl12P40224 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.3■□□□□ 0.04
Cxcl12P40224 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.3■□□□□ 0.04
Cxcl12P40224 Rarb-207ENSMUST00000225921 2756 ntBASIC15.3■□□□□ 0.04
Cxcl12P40224 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.3■□□□□ 0.04
Cxcl12P40224 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cxcl12P40224 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cxcl12P40224 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl12P40224 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Cxcl12P40224 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cxcl12P40224 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cxcl12P40224 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cxcl12P40224 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.29■□□□□ 0.04
Cxcl12P40224 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.29■□□□□ 0.04
Cxcl12P40224 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cxcl12P40224 Gm27701-201ENSMUST00000184498 110 ntBASIC15.29■□□□□ 0.04
Cxcl12P40224 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.29■□□□□ 0.04
Cxcl12P40224 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.29■□□□□ 0.04
Cxcl12P40224 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.29■□□□□ 0.04
Cxcl12P40224 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.29■□□□□ 0.04
Cxcl12P40224 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.29■□□□□ 0.04
Cxcl12P40224 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cxcl12P40224 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl12P40224 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl12P40224 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl12P40224 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl12P40224 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl12P40224 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cxcl12P40224 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl12P40224 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms