Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.53■□□□□ 0.72
Col18a1P39061 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.53■□□□□ 0.72
Col18a1P39061 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col18a1P39061 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col18a1P39061 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC19.53■□□□□ 0.72
Col18a1P39061 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC19.53■□□□□ 0.72
Col18a1P39061 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col18a1P39061 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col18a1P39061 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC19.52■□□□□ 0.72
Col18a1P39061 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col18a1P39061 Gm29649-201ENSMUST00000185649 419 ntBASIC19.52■□□□□ 0.72
Col18a1P39061 Gm24526-201ENSMUST00000082921 158 ntBASIC19.52■□□□□ 0.72
Col18a1P39061 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col18a1P39061 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col18a1P39061 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col18a1P39061 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col18a1P39061 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col18a1P39061 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col18a1P39061 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC19.52■□□□□ 0.71
Col18a1P39061 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Col18a1P39061 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Col18a1P39061 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC19.52■□□□□ 0.71
Col18a1P39061 Gm38002-201ENSMUST00000193255 180 ntBASIC19.52■□□□□ 0.71
Col18a1P39061 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC19.52■□□□□ 0.71
Col18a1P39061 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC19.52■□□□□ 0.71
Col18a1P39061 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Col18a1P39061 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col18a1P39061 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col18a1P39061 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col18a1P39061 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Col18a1P39061 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col18a1P39061 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col18a1P39061 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col18a1P39061 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col18a1P39061 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col18a1P39061 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC19.51■□□□□ 0.71
Col18a1P39061 Gm43758-201ENSMUST00000199500 367 ntBASIC19.51■□□□□ 0.71
Col18a1P39061 Gm18905-201ENSMUST00000205454 928 ntBASIC19.51■□□□□ 0.71
Col18a1P39061 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Col18a1P39061 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col18a1P39061 Gm43195-201ENSMUST00000200614 2332 ntBASIC19.51■□□□□ 0.71
Col18a1P39061 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col18a1P39061 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC19.51■□□□□ 0.71
Col18a1P39061 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Col18a1P39061 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col18a1P39061 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Col18a1P39061 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col18a1P39061 Gm16177-201ENSMUST00000120728 718 ntBASIC19.5■□□□□ 0.71
Col18a1P39061 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col18a1P39061 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col18a1P39061 Gm3786-201ENSMUST00000202659 378 ntBASIC19.5■□□□□ 0.71
Col18a1P39061 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col18a1P39061 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC19.5■□□□□ 0.71
Col18a1P39061 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col18a1P39061 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col18a1P39061 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col18a1P39061 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col18a1P39061 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.5■□□□□ 0.71
Col18a1P39061 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col18a1P39061 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC19.5■□□□□ 0.71
Col18a1P39061 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
Col18a1P39061 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC19.49■□□□□ 0.71
Col18a1P39061 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC19.49■□□□□ 0.71
Col18a1P39061 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC19.49■□□□□ 0.71
Col18a1P39061 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC19.49■□□□□ 0.71
Col18a1P39061 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col18a1P39061 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col18a1P39061 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Col18a1P39061 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.49■□□□□ 0.71
Col18a1P39061 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col18a1P39061 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col18a1P39061 Gm37466-201ENSMUST00000195692 652 ntBASIC19.49■□□□□ 0.71
Col18a1P39061 Gm19309-201ENSMUST00000218295 205 ntBASIC19.49■□□□□ 0.71
Col18a1P39061 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC19.49■□□□□ 0.71
Col18a1P39061 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col18a1P39061 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col18a1P39061 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col18a1P39061 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.48■□□□□ 0.71
Col18a1P39061 Gm21038-201ENSMUST00000222205 1383 ntBASIC19.48■□□□□ 0.71
Col18a1P39061 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col18a1P39061 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col18a1P39061 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col18a1P39061 Gm29199-201ENSMUST00000187766 775 ntBASIC19.48■□□□□ 0.71
Col18a1P39061 Gm7783-201ENSMUST00000204795 781 ntBASIC19.48■□□□□ 0.71
Col18a1P39061 AC139350.3-201ENSMUST00000226151 420 ntBASIC19.48■□□□□ 0.71
Col18a1P39061 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col18a1P39061 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col18a1P39061 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col18a1P39061 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Col18a1P39061 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col18a1P39061 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col18a1P39061 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col18a1P39061 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col18a1P39061 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC19.47■□□□□ 0.71
Col18a1P39061 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.47■□□□□ 0.71
Col18a1P39061 Gm12384-201ENSMUST00000119228 919 ntBASIC19.47■□□□□ 0.71
Col18a1P39061 Gm26083-201ENSMUST00000157904 193 ntBASIC19.47■□□□□ 0.71
Col18a1P39061 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Col18a1P39061 Gm43822-201ENSMUST00000200285 476 ntBASIC19.47■□□□□ 0.71
Col18a1P39061 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms